STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109990815Phosphatase and actin regulator. (691 aa)    
Predicted Functional Partners:
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.646
LOC109992897
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.646
LOC109988168
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.646
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.440
LOC109987581
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.440
tbl2
Transducin (beta)-like 2.
      
 0.422
LOC109987455
Cytochrome b5 reductase 4.
     
 0.418
kif3a
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.414
LHFPL6
LHFPL tetraspan subfamily member 6.
     
 0.411
slitrk6
SLIT and NTRK-like family, member 6.
      
 0.408
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.