STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109992143C-type lectin domain-containing protein. (372 aa)    
Predicted Functional Partners:
f2
Coagulation factor II (thrombin); Belongs to the peptidase S1 family.
    
 0.936
ENSLBEP00000038813
Gla domain-containing protein.
    
 0.936
ENSLBEP00000038814
Kringle domain-containing protein.
    
 0.936
proc
Protein C (inactivator of coagulation factors Va and VIIIa), a.
    
 0.917
ENSLBEP00000011796
C-type lectin domain-containing protein.
    
 0.741
ENSLBEP00000033866
Uncharacterized protein.
   
  0.712
LOC109983404
Im:7152348.
   
 0.651
ENSLBEP00000011618
Tudor domain-containing protein.
    
 0.648
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.648
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.646
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.