STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTFP1Mitochondrial fission process 1. (165 aa)    
Predicted Functional Partners:
ubxn7
UBX domain protein 7.
    
  0.736
rps27a
Ribosomal protein S27a.
    
  0.595
tomm70
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
     
 0.572
ccdc22
Coiled-coil domain containing 22.
   
 
  0.513
dap3
Death associated protein 3.
      
 0.506
ENSLBEP00000020064
Sorting nexin 15.
      
 0.479
usp30
Ubiquitin carboxyl-terminal hydrolase.
     
 0.461
usp44
Ubiquitin carboxyl-terminal hydrolase.
     
 0.461
usp49
Ubiquitin carboxyl-terminal hydrolase.
     
 0.461
usp3
Ubiquitin carboxyl-terminal hydrolase.
     
 0.461
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.