STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109983995Hemopexin-like. (442 aa)    
Predicted Functional Partners:
LOC109987082
Alpha-1-microglobulin/bikunin precursor.
   
 
 0.846
LOC109995250
Alpha-2-HS-glycoprotein 2.
   
  
 0.769
LOC109993821
Uncharacterized protein.
   
  
 0.769
ENSLBEP00000018046
Fibrinogen alpha chain.
   
 
 0.743
ENSLBEP00000018161
Fibrinogen C-terminal domain-containing protein.
   
 
 0.743
fgg
Fibrinogen gamma chain.
   
 
 0.716
timp4
TIMP metallopeptidase inhibitor 4, tandem duplicate 2.
    
 0.674
LOC109993327
TIMP metallopeptidase inhibitor 2a.
    
 0.671
LOC109994449
TIMP metallopeptidase inhibitor 2b.
    
 0.640
TIMP3
TIMP metallopeptidase inhibitor 3.
    
 0.639
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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