STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000026152ANK_REP_REGION domain-containing protein. (110 aa)    
Predicted Functional Partners:
ift81
Intraflagellar transport 81 homolog.
    
 0.712
LOC109988560
Serine/threonine-protein phosphatase.
   
 0.687
PPP6C
Serine/threonine-protein phosphatase.
   
 0.687
ppp6r3
Protein phosphatase 6, regulatory subunit 3.
    
 0.671
LOC109982179
Protein phosphatase 6, regulatory subunit 2b.
    
 0.671
ppp6r2
Protein phosphatase 6, regulatory subunit 2a.
    
 0.671
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.665
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.642
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.631
acp5
Tartrate-resistant acid phosphatase type 5.
   
 0.626
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.