STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110005316Arrestin_C domain-containing protein. (410 aa)    
Predicted Functional Partners:
LOC109988736
Thioredoxin; Belongs to the thioredoxin family.
    
 0.948
LOC109988737
Thioredoxin domain-containing protein.
    
 0.948
txn2
Thioredoxin 2.
    
 0.922
LOC109980837
E3 ubiquitin-protein ligase.
    
 
 0.843
LOC109985574
E3 ubiquitin-protein ligase.
    
 
 0.843
ENSLBEP00000016462
NLRC4_HD2 domain-containing protein.
    
 0.827
ENSLBEP00000020734
NACHT domain-containing protein.
    
 0.827
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
    
   0.684
LOC109985568
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
   0.684
ptpn11
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
   0.684
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.