STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPY19L4Dpy-19 like 4. (762 aa)    
Predicted Functional Partners:
casc1
Cancer susceptibility candidate 1.
   
    0.723
tmtc3
Transmembrane O-mannosyltransferase targeting cadherins 3.
   
  
 0.550
ccnq
Cyclin Q; Belongs to the cyclin family.
      
 0.523
noc4l
Nucleolar complex associated 4 homolog.
      
 0.514
LOC109981634
Hyaluronan binding protein 4.
      
 0.506
gk5
Glycerol kinase 5; Belongs to the FGGY kinase family.
      
 0.489
coq5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).
      
 0.478
ska1
Spindle and kinetochore associated complex subunit 1.
      
 0.467
snx13
Sorting nexin 13.
   
    0.457
tsr3
Probable ribosome biogenesis protein; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.416
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.