STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sash1SAM and SH3 domain containing 1a. (1221 aa)    
Predicted Functional Partners:
SAMD5
Sterile alpha motif domain containing 5.
 
    
 0.598
pik3c2a
Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha; Belongs to the PI3/PI4-kinase family.
  
  
  0.589
LOC110001052
Uncharacterized protein.
    
  0.580
LOC109979027
Uncharacterized protein.
    
  0.580
LOC109979031
Uncharacterized protein.
    
  0.580
ENSLBEP00000013403
Uncharacterized protein.
    
  0.580
LOC109991970
Phosphoinositide-3-kinase, regulatory subunit 2 (beta).
    
  0.580
LOC109998922
Phosphoinositide-3-kinase, regulatory subunit 1 (alpha).
    
  0.580
LOC109990968
Uncharacterized protein.
    
  0.580
shc1
SHC (Src homology 2 domain containing) transforming protein 1.
    
 0.549
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.