STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000026491FERM and PDZ domain containing 1a. (260 aa)    
Predicted Functional Partners:
ENSLBEP00000026448
Uncharacterized protein.
 
      0.897
LOC109983841
TPR_REGION domain-containing protein.
    
 
 0.645
LOC109984024
Uncharacterized protein.
    
 
 0.645
gpsm1
G protein signaling modulator 1b.
    
 
 0.593
LOC109996475
Germ cell nuclear acidic peptidase.
   
  
 0.587
lenep
Lens epithelial protein.
      
 0.559
ENSLBEP00000029237
Uncharacterized protein.
    
 
 0.559
ENSLBEP00000006849
Uncharacterized protein.
      
 0.557
LOC109995040
EF-hand domain-containing protein.
      
 0.519
flad1
FAD synthase; Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme. In the C-terminal section; belongs to the PAPS reductase family. FAD1 subfamily.
      
 0.473
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (26%) [HD]