STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109996666Torsin. (337 aa)    
Predicted Functional Partners:
ENSLBEP00000024149
Uncharacterized protein.
    
 
 0.853
ENSLBEP00000024171
Uncharacterized protein.
    
 
 0.853
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
   
 0.756
cops5
COP9 signalosome subunit 5.
     
 0.707
cops2
COP9 signalosome subunit 2.
   
 
  0.701
cops8
COP9 signalosome subunit 8.
   
 
  0.688
ppp1r42
Protein phosphatase 1, regulatory subunit 42.
     
 0.641
cunh9orf78
Zgc:103692.
 
    
 0.575
asns
Asparagine synthetase [glutamine-hydrolyzing].
      
 0.546
ENSLBEP00000016027
Nucleoporin 35.
      
 0.508
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.