STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iqcb1Uncharacterized protein. (698 aa)    
Predicted Functional Partners:
cep290
Centrosomal protein 290.
    
 
 0.925
ENSLBEP00000011188
Uncharacterized protein.
    
 
 0.925
ENSLBEP00000024795
Uncharacterized protein.
     
 0.843
LOC109975538
Uncharacterized protein.
   
 0.800
ENSLBEP00000007763
Uncharacterized protein.
   
 0.800
LOC109998604
RAB11B, member RAS oncogene family, a.
   
 0.800
LOC109992000
Uncharacterized protein.
   
 0.800
LOC109992034
RAB11a, member RAS oncogene family, like.
   
 0.800
LOC110001413
RAB11a, member RAS oncogene family.
   
 0.800
LOC110004979
RAB3A interacting protein (rabin3).
    
 0.746
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.