STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnf26Ring finger protein 26. (412 aa)    
Predicted Functional Partners:
UBA3
Ubiquitin like modifier activating enzyme 3.
     
 0.548
LOC109983412
Ubiquitin-like modifier activating enzyme 3.
     
 0.548
tmem33
Transmembrane protein 33.
    
 
 0.496
rps25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
      
 0.480
TMEM43
Uncharacterized protein.
    
 
 0.436
tollip
Toll interacting protein.
    
 
 0.423
LOC109986472
Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.
   
 
  0.416
fzd3
Frizzled class receptor 3a; Belongs to the G-protein coupled receptor Fz/Smo family.
   
 
  0.416
fzd6
Frizzled class receptor 6; Belongs to the G-protein coupled receptor Fz/Smo family.
   
 
  0.413
LOC109996417
Uncharacterized protein.
    
 
 0.410
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.