Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC109982852 | LOC109989387 | ENSLBEP00000001420 | ENSLBEP00000037487 | Mago homolog, exon junction complex subunit. | RAN binding protein 2. | 0.984 |
LOC109982852 | LOC109993875 | ENSLBEP00000001420 | ENSLBEP00000030616 | Mago homolog, exon junction complex subunit. | Aly/REF export factor. | 0.982 |
LOC109982852 | LOC109994832 | ENSLBEP00000001420 | ENSLBEP00000020672 | Mago homolog, exon junction complex subunit. | RRM domain-containing protein. | 0.890 |
LOC109982852 | casc3 | ENSLBEP00000001420 | ENSLBEP00000007025 | Mago homolog, exon junction complex subunit. | Casc3 exon junction complex subunit. | 0.993 |
LOC109982852 | cwc22 | ENSLBEP00000001420 | ENSLBEP00000027063 | Mago homolog, exon junction complex subunit. | CWC22 spliceosome associated protein homolog. | 0.940 |
LOC109982852 | eif4a3 | ENSLBEP00000001420 | ENSLBEP00000027439 | Mago homolog, exon junction complex subunit. | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | 0.999 |
LOC109982852 | rbm8a | ENSLBEP00000001420 | ENSLBEP00000020448 | Mago homolog, exon junction complex subunit. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.999 |
LOC109982852 | rnps1 | ENSLBEP00000001420 | ENSLBEP00000031924 | Mago homolog, exon junction complex subunit. | RNA binding protein S1, serine-rich domain. | 0.890 |
LOC109989387 | LOC109982852 | ENSLBEP00000037487 | ENSLBEP00000001420 | RAN binding protein 2. | Mago homolog, exon junction complex subunit. | 0.984 |
LOC109989387 | LOC109993875 | ENSLBEP00000037487 | ENSLBEP00000030616 | RAN binding protein 2. | Aly/REF export factor. | 0.986 |
LOC109989387 | LOC109994832 | ENSLBEP00000037487 | ENSLBEP00000020672 | RAN binding protein 2. | RRM domain-containing protein. | 0.700 |
LOC109989387 | casc3 | ENSLBEP00000037487 | ENSLBEP00000007025 | RAN binding protein 2. | Casc3 exon junction complex subunit. | 0.981 |
LOC109989387 | cwc22 | ENSLBEP00000037487 | ENSLBEP00000027063 | RAN binding protein 2. | CWC22 spliceosome associated protein homolog. | 0.838 |
LOC109989387 | eif4a3 | ENSLBEP00000037487 | ENSLBEP00000027439 | RAN binding protein 2. | Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. | 0.987 |
LOC109989387 | ngdn | ENSLBEP00000037487 | ENSLBEP00000036415 | RAN binding protein 2. | Neuroguidin, EIF4E binding protein. | 0.433 |
LOC109989387 | rbm8a | ENSLBEP00000037487 | ENSLBEP00000020448 | RAN binding protein 2. | RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. | 0.983 |
LOC109989387 | rnps1 | ENSLBEP00000037487 | ENSLBEP00000031924 | RAN binding protein 2. | RNA binding protein S1, serine-rich domain. | 0.700 |
LOC109993875 | LOC109982852 | ENSLBEP00000030616 | ENSLBEP00000001420 | Aly/REF export factor. | Mago homolog, exon junction complex subunit. | 0.982 |
LOC109993875 | LOC109989387 | ENSLBEP00000030616 | ENSLBEP00000037487 | Aly/REF export factor. | RAN binding protein 2. | 0.986 |
LOC109993875 | LOC109994832 | ENSLBEP00000030616 | ENSLBEP00000020672 | Aly/REF export factor. | RRM domain-containing protein. | 0.883 |
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