STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109984363Uncharacterized protein. (291 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.871
LOC109992955
Elongin B.
    
 0.753
ELOB
Elongin B.
    
 0.753
LOC109991252
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.745
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.745
ift81
Intraflagellar transport 81 homolog.
    
 0.712
asb6
Ankyrin repeat and SOCS box containing 6.
  
 
 0.675
commd8
COMM domain containing 8.
   
  0.666
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.665
LOC109982190
COMM domain containing 4.
    
 0.644
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.