STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bend3BEN domain containing 3. (817 aa)    
Predicted Functional Partners:
ENSLBEP00000000113
Excision repair cross-complementation group 6-like.
   
   0.901
ercc6l2
Excision repair cross-complementation group 6-like 2.
   
   0.771
chrd
Chordin.
    
 0.659
ENSLBEP00000037044
Noggin; Belongs to the noggin family.
    
 0.619
LOC109986765
Noggin; Belongs to the noggin family.
    
 0.614
mlec
Malectin.
      
 0.505
sec63
SEC63 homolog, protein translocation regulator.
      
 0.499
amer2
APC membrane recruitment protein 2.
  
 
  0.490
bmpr1a
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.485
LOC109990532
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.485
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.