STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clasrpCLK4-associating serine/arginine rich protein. (634 aa)    
Predicted Functional Partners:
gphn
Gephyrin b.
 
      0.660
LOC110000293
Gephyrin a.
 
      0.607
ccnl1
Cyclin L1a; Belongs to the cyclin family.
   
  
 0.605
CFAP20
Cilia and flagella associated protein 20.
   
   0.602
LOC110000148
Cilia and flagella associated protein 20.
   
   0.602
ENSLBEP00000037387
GRIP domain-containing protein.
      
 0.558
mrpl51
Mitochondrial ribosomal protein L51.
      
 0.553
dab2
DAB adaptor protein 2.
    
 
 0.496
rfc5
Replication factor C (activator 1) 5.
   
 
 0.495
snapc4
Uncharacterized protein.
   
    0.493
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.