STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110002622DUF3338 domain-containing protein. (564 aa)    
Predicted Functional Partners:
sav1
Salvador family WW domain containing protein 1.
    
 0.680
frmd6
FERM domain containing 6.
    
 0.642
LOC109983213
FERM domain containing 1.
    
 0.642
trip12
Thyroid hormone receptor interactor 12.
    
 0.599
lats2
Large tumor suppressor kinase 2.
    
 
 0.592
lats1
Large tumor suppressor kinase 1.
    
 
 0.592
LOC110002895
Uncharacterized protein.
    
 
 0.541
LOC109992933
Proline rich 14.
  
 
   0.535
LOC110004670
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.531
LOC110000245
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.531
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.