STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110005539C-type lectin domain-containing protein. (250 aa)    
Predicted Functional Partners:
serping1
Uncharacterized protein; Belongs to the serpin family.
     
 0.873
ENSLBEP00000008634
Peptidase S1 domain-containing protein.
   
 0.793
LOC110000463
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.793
ENSLBEP00000011661
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 0.793
LOC109991914
Si:ch1073-280e3.1; Belongs to the peptidase S1 family.
   
 0.760
LOC109991946
Si:ch1073-280e3.1; Belongs to the peptidase S1 family.
   
 0.760
cfb
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 0.760
LOC109986674
Complement 4B (Chido blood group).
    
 0.709
LOC109998169
Complement component c3b, tandem duplicate 2.
    
 0.709
LOC110000750
Uncharacterized protein.
    
 0.709
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.