STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
armc8Armadillo repeat containing 8. (589 aa)    
Predicted Functional Partners:
LOC109980969
GID complex subunit 8 homolog b (S. cerevisiae).
    
 
 0.961
GID8
GID complex subunit 8 homolog.
    
 
 0.961
GID4
GID complex subunit 4 homolog.
    
 
 0.957
GID4-2
GID complex subunit 4 homolog.
    
 
 0.957
ranbp10
RAN binding protein 10.
   
 
 0.945
LOC109999615
RAN binding protein 9.
   
 
 0.945
LOC109976639
Uncharacterized protein.
   
 
 0.945
LOC109987683
WD repeat domain 26b.
    
 
 0.924
LOC110000508
WD repeat domain 26a.
    
 
 0.924
LOC110004969
Uncharacterized protein.
    
 
 0.924
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.