STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000028755Solute carrier family 46 member 2. (414 aa)    
Predicted Functional Partners:
mfsd10
Major facilitator superfamily domain containing 10.
   
  
 0.581
mfsd9
Major facilitator superfamily domain containing 9.
      
 0.554
susd1
Sushi domain containing 1.
    
 
 0.551
tdrd3
Tudor domain containing 3.
      
 0.546
tbata
Thymus, brain and testes associated.
   
  
 0.495
slc29a4
Solute carrier family 29 member 4.
      
 0.481
slc29a3
Solute carrier family 29 member 3.
      
 0.476
glipr2
GLI pathogenesis-related 2, like; Belongs to the CRISP family.
      
 0.424
ctsc
Cathepsin C; Belongs to the peptidase C1 family.
      
 0.422
OTOR
Otoraplin.
      
 0.420
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.