STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfsd3Major facilitator superfamily domain containing 3. (421 aa)    
Predicted Functional Partners:
LOC109994457
Malate synthase-like.
  
 0.884
LOC109987455
Cytochrome b5 reductase 4.
    
  0.830
LOC109984868
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.714
b3galt6
Hexosyltransferase.
     
 0.714
b4galnt1
Beta-1,4 N-acetylgalactosaminyltransferase.
     
 0.714
ephx2
Epoxide hydrolase 2, cytoplasmic.
    
 0.674
LOC109983935
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.610
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.610
LOC110001922
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.610
tk1
Thymidine kinase.
    
 0.599
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.