STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109993214WH1 domain-containing protein. (399 aa)    
Predicted Functional Partners:
abl2
Tyrosine-protein kinase.
    
 0.841
abl1
Tyrosine-protein kinase.
    
 0.841
nek2
NIMA-related kinase 2.
    
 0.821
nf1
Neurofibromin 1b.
    
 0.821
LOC109994083
BAI1-associated protein 2a.
    
 0.810
LOC110001447
BAI1 associated protein 2.
    
 0.810
LOC110000479
Zyxin.
   
 0.793
LOC109993723
Zgc:158689.
    
 0.784
fblim1
Uncharacterized protein.
    
 0.764
LOC109983007
Tight junction protein 1a; Belongs to the MAGUK family.
   
 0.760
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.