STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000029182Uncharacterized protein. (196 aa)    
Predicted Functional Partners:
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
  0.471
LOC109983093
Nerve growth factor receptor a (TNFR superfamily, member 16).
     
 0.446
LOC109981953
Uncharacterized protein.
    
  0.435
LOC109987847
SH3 and PX domains 2Aa.
    
  0.435
ncf4
Neutrophil cytosolic factor 4.
    
  0.435
LOC109975168
Neutrophil cytosolic factor 1.
    
  0.435
sh3pxd2b
SH3 and PX domains 2B.
    
  0.435
LOC110000260
Neutrophil cytosol factor 1-like.
    
  0.435
LOC109990431
NADPH oxidase organizer 1b.
    
  0.435
LOC109985881
NADPH oxidase organizer 1a.
    
  0.435
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.