STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109988168Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (323 aa)    
Predicted Functional Partners:
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.973
rb1
Retinoblastoma 1.
   
 0.965
cpsf1
Cleavage and polyadenylation specific factor 1.
    
 0.957
ssu72
SSU72 homolog, RNA polymerase II CTD phosphatase.
   
 0.955
shoc2
SHOC2 leucine rich repeat scaffold protein.
    
 0.955
fip1l1
FIP1 like 1b (S. cerevisiae).
    
 0.953
ppp1r7
Protein phosphatase 1, regulatory (inhibitor) subunit 7.
 
 
 0.950
ENSLBEP00000027065
WD_REPEATS_REGION domain-containing protein.
    
 0.945
wdr82
WD repeat domain 82.
    
 0.945
ppp1r12c
Protein phosphatase 1, regulatory subunit 12C.
  
 0.944
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.