STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110003253Phosphatidylinositol 4-kinase, catalytic, beta; Belongs to the PI3/PI4-kinase family. (818 aa)    
Predicted Functional Partners:
ENSLBEP00000017593
Acyl-Coenzyme A binding domain containing 3.
    
 
 0.968
LOC109998199
Phosphatidylinositol 4-kinase, catalytic, alpha a; Belongs to the PI3/PI4-kinase family.
    
0.953
LOC109991553
Phosphatidylinositol 4-kinase, catalytic, alpha b; Belongs to the PI3/PI4-kinase family.
    
0.953
ENSLBEP00000032440
Uncharacterized protein.
 
  
 0.951
LOC109975538
Uncharacterized protein.
    
 0.932
ENSLBEP00000007763
Uncharacterized protein.
    
 0.932
LOC109998604
RAB11B, member RAS oncogene family, a.
    
 0.932
LOC109992000
Uncharacterized protein.
    
 0.932
LOC109992034
RAB11a, member RAS oncogene family, like.
    
 0.932
LOC110001413
RAB11a, member RAS oncogene family.
    
 0.932
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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