STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NR4A1Nuclear receptor subfamily 4 group A member 1. (587 aa)    
Predicted Functional Partners:
LOC109987681
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
  0.846
LOC109986633
Retinoid x receptor, beta b.
    
0.789
LOC109994312
Uncharacterized protein.
    
0.789
bcl2
BCL2 apoptosis regulator b.
   
 0.789
LOC110001923
Uncharacterized protein.
    
0.789
rxra
Retinoid X receptor, alpha a.
    
0.789
LOC110005399
BH4_2 domain-containing protein.
   
 0.789
ncor1
Nuclear receptor corepressor 1.
    
 0.690
ncor2
Nuclear receptor corepressor 2.
    
 0.690
LOC109988834
Nuclear receptor subfamily 1, group D, member 2a.
    
0.649
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.