STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000029975Bravo_FIGEY domain-containing protein. (80 aa)    
Predicted Functional Partners:
cntn2
Contactin 2.
   
 0.825
LOC109996330
Contactin 1b.
    
 0.802
CNTN1
Contactin 1.
    
 0.802
cntnap1
Contactin associated protein 1.
   
 0.797
cntn5
Contactin 5.
    
 0.768
LOC109983188
Contactin 4.
    
 0.768
LOC109983172
Contactin 3b.
    
 0.768
LOC109982864
Contactin 3a, tandem duplicate 2.
    
 0.768
LOC109982872
Contactin 3a, tandem duplicate 1.
    
 0.768
LOC109994901
Protein tyrosine phosphatase receptor type Ga.
    
 0.751
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.