STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000030001Uncharacterized protein. (249 aa)    
Predicted Functional Partners:
ENSLBEP00000030020
ARID domain-containing protein.
 
      0.900
LOC109995070
Actin-like 6A; Belongs to the actin family.
    
 
 0.707
LOC109990107
Polybromo 1.
   
 
 0.685
LOC109980589
Polybromo 1, like.
   
 
 0.685
SAP30L
SAP30 like.
    
 0.673
LOC110003100
Uncharacterized protein.
    
 0.673
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 
 0.660
cunh16orf87
Zgc:92818.
    
 
 0.658
sap18
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
     
 0.652
LOC109983669
BRMS1 like transcriptional repressor b.
    
 0.628
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.