STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110005202TEA domain-containing protein. (360 aa)    
Predicted Functional Partners:
yap1
Yes-associated protein 1.
   
 0.977
ENSLBEP00000032008
Vestigial-like family member 2a.
    
 
 0.889
LOC109981008
Vestigial-like family member 4a.
    
 
 0.794
vgll4
Vestigial-like family member 4b.
    
 
 0.794
lef1
Lymphoid enhancer-binding factor 1.
    
  0.774
tcf7
Transcription factor 7.
    
  0.774
ENSLBEP00000019966
Uncharacterized protein.
    
 
 0.748
LOC109983351
Vestigial like 4 like.
    
 
 0.738
LOC110006056
Insulinoma-associated 1a.
    
 
 0.681
LOC109992429
Insulinoma-associated 1b.
    
 
 0.681
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.