STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109990922Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. (446 aa)    
Predicted Functional Partners:
LOC109978098
Alpha-L-fucosidase 2.
  
 
0.870
pgghg
Protein-glucosylgalactosylhydroxylysine glucosidase.
    
 0.835
zbtb8b
Zinc finger and BTB domain containing 8B.
 
   
  0.828
naga
Alpha-galactosidase.
   
 
 0.755
LOC109978867
Alpha-galactosidase.
   
 
 0.755
LOC110000814
alpha-N-acetylgalactosaminidase-like.
   
 
 0.755
gla
Alpha-galactosidase.
   
 
 0.754
ganab
Glucosidase, alpha; neutral AB; Belongs to the glycosyl hydrolase 31 family.
    
 0.652
LOC109980869
Myogenesis regulating glycosidase (putative); Belongs to the glycosyl hydrolase 31 family.
    
 0.606
LOC109989350
Si:ch211-236l14.4; Belongs to the glycosyl hydrolase 31 family.
    
 0.606
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.