Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC110006260 | drg1 | ENSLBEP00000016786 | ENSLBEP00000030384 | RWD domain-containing protein. | Developmentally regulated GTP binding protein 1. | 0.949 |
LOC110006260 | zc3h15 | ENSLBEP00000016786 | ENSLBEP00000003442 | RWD domain-containing protein. | Zinc finger CCCH-type containing 15. | 0.762 |
drg1 | LOC110006260 | ENSLBEP00000030384 | ENSLBEP00000016786 | Developmentally regulated GTP binding protein 1. | RWD domain-containing protein. | 0.949 |
drg1 | mrps7 | ENSLBEP00000030384 | ENSLBEP00000036518 | Developmentally regulated GTP binding protein 1. | Mitochondrial ribosomal protein S7. | 0.930 |
drg1 | nhp2 | ENSLBEP00000030384 | ENSLBEP00000002703 | Developmentally regulated GTP binding protein 1. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.909 |
drg1 | rpl23a | ENSLBEP00000030384 | ENSLBEP00000020144 | Developmentally regulated GTP binding protein 1. | Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. | 0.922 |
drg1 | rpl8 | ENSLBEP00000030384 | ENSLBEP00000027496 | Developmentally regulated GTP binding protein 1. | Ribosomal protein L8. | 0.926 |
drg1 | rplp0 | ENSLBEP00000030384 | ENSLBEP00000020036 | Developmentally regulated GTP binding protein 1. | 60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. | 0.925 |
drg1 | rps13 | ENSLBEP00000030384 | ENSLBEP00000004649 | Developmentally regulated GTP binding protein 1. | Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. | 0.909 |
drg1 | rps3 | ENSLBEP00000030384 | ENSLBEP00000027781 | Developmentally regulated GTP binding protein 1. | Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | 0.935 |
drg1 | rwdd1 | ENSLBEP00000030384 | ENSLBEP00000010737 | Developmentally regulated GTP binding protein 1. | RWD domain containing 1. | 0.949 |
drg1 | zc3h15 | ENSLBEP00000030384 | ENSLBEP00000003442 | Developmentally regulated GTP binding protein 1. | Zinc finger CCCH-type containing 15. | 0.998 |
mrps7 | drg1 | ENSLBEP00000036518 | ENSLBEP00000030384 | Mitochondrial ribosomal protein S7. | Developmentally regulated GTP binding protein 1. | 0.930 |
mrps7 | nhp2 | ENSLBEP00000036518 | ENSLBEP00000002703 | Mitochondrial ribosomal protein S7. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.966 |
mrps7 | rpl23a | ENSLBEP00000036518 | ENSLBEP00000020144 | Mitochondrial ribosomal protein S7. | Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family. | 0.990 |
mrps7 | rpl8 | ENSLBEP00000036518 | ENSLBEP00000027496 | Mitochondrial ribosomal protein S7. | Ribosomal protein L8. | 0.989 |
mrps7 | rplp0 | ENSLBEP00000036518 | ENSLBEP00000020036 | Mitochondrial ribosomal protein S7. | 60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. | 0.988 |
mrps7 | rps13 | ENSLBEP00000036518 | ENSLBEP00000004649 | Mitochondrial ribosomal protein S7. | Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. | 0.990 |
mrps7 | rps3 | ENSLBEP00000036518 | ENSLBEP00000027781 | Mitochondrial ribosomal protein S7. | Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | 0.996 |
mrps7 | zc3h15 | ENSLBEP00000036518 | ENSLBEP00000003442 | Mitochondrial ribosomal protein S7. | Zinc finger CCCH-type containing 15. | 0.662 |
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