STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
itih2Inter-alpha-trypsin inhibitor heavy chain 2. (889 aa)    
Predicted Functional Partners:
ENSLBEP00000003653
Coenzyme Q3 methyltransferase.
   
 0.950
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
    
 0.927
sord
Sorbitol dehydrogenase.
  
 
 0.914
LOC109978902
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.865
LOC109999524
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.865
gmps
Guanine monophosphate synthase.
    
  0.848
LOC110001735
Uncharacterized protein; Belongs to the 5'-nucleotidase family.
    
 0.835
NT5E
5'-nucleotidase ecto.
    
 0.835
cenpv
Centromere protein V.
    
  0.832
rnls
Renalase, FAD-dependent amine oxidase.
    
  0.830
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.