STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109999648MyoD family inhibitor domain containing. (276 aa)    
Predicted Functional Partners:
LOC109983860
2-epi-5-epi-valiolone synthase.
      
 0.555
LOC109999993
FERM domain containing 4Bb.
    
 
 0.544
AANAT
Arylalkylamine N-acetyltransferase 1.
    
 
 0.517
spry1
Sprouty homolog 1, antagonist of FGF signaling (Drosophila).
  
 
 
 0.464
LOC109995025
Pre-B-cell leukemia homeobox interacting protein 1a.
  
 
   0.459
frmd4a
FERM domain containing 4A.
    
 
 0.448
LOC109983877
FERM domain containing 4Ba.
    
 
 0.448
hoxa3
Homeobox A4a.
    
 
 0.436
opn3
Opsin 3.
    
 
 0.419
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.