STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109981199Scavenger receptor class B, member 2c; Belongs to the CD36 family. (481 aa)    
Predicted Functional Partners:
cd63
Tetraspanin.
    
 0.848
ENSLBEP00000007473
Uncharacterized protein; Belongs to the CD36 family.
  
  
 
0.826
LOC109997139
Uncharacterized protein; Belongs to the CD36 family.
  
  
 
0.819
vamp7
Synaptobrevin-like 1; Belongs to the synaptobrevin family.
     
 0.725
dab2
DAB adaptor protein 2.
     
 0.714
LOC114921004
Tetraspanin.
   
 0.708
vamp3
V-SNARE coiled-coil homology domain-containing protein.
   
  0.704
ldlrap1
Low density lipoprotein receptor adaptor protein 1b.
     
 0.675
LOC109986400
Insulin-like growth factor 2 receptor.
   
 
 0.675
gale
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.658
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.