STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgap18Rho GTPase activating protein 18. (707 aa)    
Predicted Functional Partners:
LOC109986049
Tensin 1b.
    
 
 0.638
LOC109978254
C2 tensin-type domain-containing protein.
    
 
 0.638
ENSLBEP00000018349
Uncharacterized protein.
    
 
 0.638
ENSLBEP00000018544
Tensin 1.
    
 
 0.638
TNS3
Tensin 3.
    
 
 0.638
LOC109985082
Tensin 2a.
    
 
 0.638
ENSLBEP00000027116
Uncharacterized protein.
    
 
 0.638
ENSLBEP00000027191
Uncharacterized protein.
    
 
 0.638
TNS3-2
Tensin 3.
    
 
 0.638
LOC110001875
SH3-domain kinase binding protein 1.
   
 
 0.534
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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