STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000031768Structural maintenance of chromosomes flexible hinge domain containing 1. (1218 aa)    
Predicted Functional Partners:
scaf11
RING-type domain-containing protein.
   
    0.770
ahctf1
AT hook containing transcription factor 1.
   
  
 0.751
LOC109989575
MABP domain-containing protein.
    
   0.592
nudcd1
NudC domain containing 1.
    
   0.584
mettl4
Methyltransferase like 4; Belongs to the MT-A70-like family.
   
  
 0.573
ENSLBEP00000012458
Mix-type homeobox gene 1.
      
 0.546
ENSLBEP00000021847
Zgc:162472.
   
    0.513
birc6
Baculoviral IAP repeat containing 6.
   
   0.503
nup133
Nucleoporin 133.
   
  
 0.496
rps27a
Ribosomal protein S27a.
    
 
 0.477
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.