STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
miipMigration and invasion inhibitory protein. (495 aa)    
Predicted Functional Partners:
LOC109993620
Tumor necrosis factor a (TNF superfamily, member 2); Belongs to the tumor necrosis factor family.
     
 0.847
LOC109995112
TNF receptor-associated factor.
    
 0.612
LOC109997441
Ring finger protein 41, like.
    
 0.612
LOC109996326
PDZ domain containing ring finger 4.
    
 0.612
PDZRN4
PDZ domain containing ring finger 4.
    
 0.612
traf7
TNF receptor-associated factor 7.
    
 0.612
pdzrn3
PDZ domain containing RING finger 3b.
    
 0.612
rnf41
Ring finger protein 41.
    
 0.612
LOC109996590
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.612
LOC109975995
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.612
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.