STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
klhl29Kelch-like family member 29. (818 aa)    
Predicted Functional Partners:
ENSLBEP00000016000
Bardet-Biedl syndrome 9.
    
 0.737
ttc8
Tetratricopeptide repeat domain 8.
    
 0.710
ubxn7
UBX domain protein 7.
    
  0.619
ENSLBEP00000020247
BTB domain-containing protein.
    
   0.593
bbs7
Bardet-Biedl syndrome 7.
    
 0.593
kbtbd8
Kelch repeat and BTB (POZ) domain containing 8.
    
  
0.593
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.580
LOC109991813
NBR1 autophagy cargo receptor b.
    
 0.534
LOC109992392
NBR1 autophagy cargo receptor a.
    
 0.534
ENSLBEP00000014278
Uncharacterized protein.
    
 0.534
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.