STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109989252Si:ch1073-100f3.2; Belongs to the mitochondrial carrier (TC 2.A.29) family. (314 aa)    
Predicted Functional Partners:
mrpl12
Mitochondrial ribosomal protein L12.
 
 
 0.911
trabd
TraB domain containing.
    
   0.596
ndufs7
NADH:ubiquinone oxidoreductase core subunit S7; Belongs to the complex I 20 kDa subunit family.
   
 
 0.583
LOC109984441
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
   
 
 0.565
LOC109983902
Plug_translocon domain-containing protein.
    
 
 0.554
SEC61A1
Plug_translocon domain-containing protein.
    
 
 0.554
clcc1
Uncharacterized protein.
   
   0.546
LOC109998381
Cytochrome c-1.
   
 
 0.507
LOC109990749
Cytochrome c oxidase assembly homolog 15 (yeast).
   
 
 0.471
phb
Prohibitin.
   
 
 0.446
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.