STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubxn2aUBX domain protein 2A. (246 aa)    
Predicted Functional Partners:
aspscr1
ASPSCR1 tether for SLC2A4, UBX domain containing.
    
 0.992
vcp
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.989
LOC110000677
Zgc:136908; Belongs to the AAA ATPase family.
   
 0.989
nsfl1c
NSFL1 (p97) cofactor (p47).
  
 
 
0.986
ubxn10
UBX domain protein 10.
    
 
 0.980
ubxn6
UBX domain protein 6.
    
 0.979
ubxn7
UBX domain protein 7.
    
 
 0.975
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.963
lactb
Lactamase, beta.
    
  0.961
ubxn1
UBX domain protein 1.
   
 0.941
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.