STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109982426Rap guanine nucleotide exchange factor (GEF) 5a. (700 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.910
ENSLBEP00000031587
C2 domain-containing protein.
    
 0.910
ENSLBEP00000031622
PDZ domain-containing protein.
    
 0.910
mras
Muscle RAS oncogene homolog.
    
 0.907
LOC109986206
RAP1A, member of RAS oncogene family b.
    
 0.879
LOC109985667
Uncharacterized protein.
    
 0.879
rras2
RAS related 2.
    
 0.871
rras
RAS related.
    
 0.871
hras
HRas proto-oncogene, GTPase a.
    
 0.747
CSDE1
Cold shock domain containing E1, RNA-binding.
    
 0.747
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.