STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC109990419Rho GTPase activating protein 17. (886 aa)    
Predicted Functional Partners:
LOC109995248
Angiomotin.
    
 0.897
LOC109994148
Cell division cycle 42.
   
 0.869
CDC42
Cell division cycle 42.
   
 0.869
LOC109995395
Uncharacterized protein.
   
 0.862
LOC110003296
Uncharacterized protein.
   
 0.862
LOC109991455
Angiomotin like 2b.
    
 0.840
amotl2
Angiomotin like 2a.
    
 0.840
LOC110001707
Rho related BTB domain containing 4.
    
 0.770
LOC109996947
Rac family small GTPase 3b.
   
 0.755
RAC1
Rac family small GTPase 1.
   
 0.755
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.