STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf280dZinc finger protein 280D. (844 aa)    
Predicted Functional Partners:
ak9
Adenylate kinase 9.
    
  0.865
cbx3
Chromobox homolog 3a (HP1 gamma homolog, Drosophila).
    
   0.704
cbx5
Chromobox homolog 5 (HP1 alpha homolog, Drosophila).
    
   0.704
CBX1
Chromobox homolog 1b (HP1 beta homolog Drosophila).
    
   0.704
CBX1-2
Uncharacterized protein.
    
   0.704
ENSLBEP00000033866
Uncharacterized protein.
    
  0.699
UBQLN4
Ubiquilin 4.
    
  0.608
YTHDC2
YTH domain containing 2.
   
  0.601
LOC109985360
BRCA1 associated RING domain 1.
    
  0.596
rnf216
Ring finger protein 216.
    
 
 0.588
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.