STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bod1l1Uncharacterized protein. (1598 aa)    
Predicted Functional Partners:
gusb
Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.
  
 0.791
galm
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.771
galns
Galactosamine (N-acetyl)-6-sulfatase.
   
 0.749
ENSLBEP00000011508
Sialidase domain-containing protein.
  
 0.721
LOC109978049
Neuraminidase 1.
  
 0.721
ENSLBEP00000034744
PKD domain-containing protein.
  
 0.702
gba
Glucosylceramidase.
  
 0.702
ugcg
UDP-glucose ceramide glucosyltransferase.
  
 
 0.701
gbe1
Glucan (1,4-alpha-), branching enzyme 1b.
    
 0.701
manba
Mannosidase, beta A, lysosomal.
   
 0.697
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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