STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnga3Cyclic nucleotide gated channel subunit alpha 3a. (670 aa)    
Predicted Functional Partners:
LOC109987853
Si:dkey-44k1.5.
  
0.950
ENSLBEP00000034828
Cyclic nucleotide gated channel beta 1a.
  
0.950
LOC110001479
Cyclic nucleotide gated channel beta 3, tandem duplicate 2.
  
0.878
LOC109986823
Calmodulin-like 4a.
     
 0.837
ENSLBEP00000028137
Cyclic nucleotide gated channel subunit alpha 1a.
  
 
 
0.835
LOC109995233
Calmodulin-like 4b.
     
 0.831
LOC109983664
Calmodulin 3a (phosphorylase kinase, delta); Belongs to the calmodulin family.
     
 0.721
LOC109989518
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
     
 0.721
LOC109990841
Uncharacterized protein; Belongs to the calmodulin family.
     
 0.721
guca1b
Guanylate cyclase activator 1B.
   
 
 0.661
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.