STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pipoxPipecolic acid oxidase. (388 aa)    
Predicted Functional Partners:
sardh
Sarcosine dehydrogenase.
  
0.962
LOC109978551
Sarcosine dehydrogenase.
  
 0.962
dmgdh
Dimethylglycine dehydrogenase.
  
 0.956
LOC109978122
DAO domain-containing protein.
  
 0.953
PDPR
Pyruvate dehydrogenase phosphatase regulatory subunit.
  
0.953
LOC109994457
Malate synthase-like.
  
 
 0.948
LOC109991423
Serine--pyruvate aminotransferase.
  
 
 0.924
LOC109982084
Serine--pyruvate aminotransferase.
  
 
 0.924
amt
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.912
LOC109990792
Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.901
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.