STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
krit1KRIT1 ankyrin repeat containing. (742 aa)    
Predicted Functional Partners:
LOC109986206
RAP1A, member of RAS oncogene family b.
    
 0.983
LOC109985667
Uncharacterized protein.
    
 0.983
ccm2
CCM2 scaffold protein.
    
 
 0.974
itgb1bp1
Integrin beta 1 binding protein 1.
    
 
 0.972
snx17
Sorting nexin 17.
    
 
 0.954
heg1
Heart development protein with EGF-like domains 1.
    
 
 0.936
LOC110003044
SEA domain-containing protein.
    
 
 0.929
ccm2l
CCM2 like scaffold protein.
    
 
 0.901
ENSLBEP00000015506
Uncharacterized protein.
    
 
 0.901
ctnnb1
Catenin (cadherin-associated protein), beta 1.
     
 0.885
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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