STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLBEP00000033630WD_REPEATS_REGION domain-containing protein. (322 aa)    
Predicted Functional Partners:
LOC109993502
Mitogen-activated protein kinase.
    
 
 0.648
ENSLBEP00000035899
CEP63 domain-containing protein.
    
 
 0.526
LOC109986546
Uncharacterized protein.
    
 
 0.516
LOC109979162
Uncharacterized protein.
    
 
 0.516
LOC109992271
Mitogen-activated protein kinase.
    
 
 0.510
LOC109990744
Mitogen-activated protein kinase.
    
 
 0.510
LOC109990779
Mitogen-activated protein kinase.
    
 
 0.510
cep135
Centrosomal protein 135.
      
 0.481
ENSLBEP00000019361
Centromere protein J.
      
 0.479
svopl
SVOP-like.
      
 0.410
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.