STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110005442Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle. (263 aa)    
Predicted Functional Partners:
ENSLBEP00000028187
Asp-B-Hydro_N domain-containing protein.
    
 0.891
ENSLBEP00000017666
Un-named hu7910.
   
 0.888
ENSLBEP00000013112
Asp-B-Hydro_N domain-containing protein.
    
  0.862
LOC109996565
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
  
  
 
0.833
LOC109995339
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
  
  
 
0.832
ENSLBEP00000011796
C-type lectin domain-containing protein.
    
 0.741
LOC109995178
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
  
  
 
0.725
ENSLBEP00000033866
Uncharacterized protein.
   
  0.719
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.705
ENSLBEP00000013648
Ins145_P3_rec domain-containing protein.
   
 0.677
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.