STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL28Kelch like family member 28. (574 aa)    
Predicted Functional Partners:
ENSLBEP00000016000
Bardet-Biedl syndrome 9.
    
 0.834
bbs1
Bardet-Biedl syndrome 1.
    
 0.833
bbs4
Bardet-Biedl syndrome 4.
    
 0.827
ttc8
Tetratricopeptide repeat domain 8.
    
 0.811
bbs7
Bardet-Biedl syndrome 7.
   
 0.805
klhl14
Kelch-like family member 14.
    
 
0.747
sqstm1
Sequestosome 1.
    
 0.724
ENSLBEP00000032673
PB1 domain-containing protein.
    
 0.724
klhl26
Kelch-like family member 26.
    
 
0.709
rbx1
Zf-rbx1 domain-containing protein.
    
 0.701
Your Current Organism:
Labrus bergylta
NCBI taxonomy Id: 56723
Other names: L. bergylta, ballan wrasse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.